dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00406
Location and strand information: 116475 - 118562 (+)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 6.1362
Protein molecular weight: 78148.77
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00407
Location and strand information: 118790 - 120160 (+)
Family: 2.A.1.1.74
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00408
Location and strand information: 120144 - 122297 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.9936
Protein molecular weight: 82048.86
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00409
Location and strand information: 122309 - 125008 (+)
Family: GH138
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.135
Protein molecular weight: 101590.02
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00410
Location and strand information: 125221 - 125682 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00411
Location and strand information: 125758 - 129942 (+)
Family: GH137|GH2|CBM57
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.1079
Protein molecular weight: 159279.06
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00412
Location and strand information: 129956 - 133288 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 5.7963
Protein molecular weight: 125705.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00413
Location and strand information: 133536 - 136796 (+)
Family: 3.2.1.40|GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.9743
Protein molecular weight: 122260.35
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00414
Location and strand information: 136820 - 138283 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00415
Location and strand information: 138304 - 140571 (+)
Family: GH139
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8509
Protein molecular weight: 85627.88
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00416
Location and strand information: 140568 - 140675 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00417
Location and strand information: 141261 - 141980 (+)
Family: 3.A.1.122.2
Protein type: TC
Protein description: putative ABC transporter ATP-binding protein YknY

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00418
Location and strand information: 141977 - 143251 (+)
Family: 3.A.1.122.2
Protein type: TC
Protein description: Macrolide export ATP-binding/permease protein MacB

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00419
Location and strand information: 143280 - 144530 (+)
Family: 3.A.1.122.1
Protein type: TC
Protein description: Macrolide export ATP-binding/permease protein MacB

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00420
Location and strand information: 144573 - 145676 (+)
Family: null
Protein type: null
Protein description: Macrolide export protein MacA

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00421
Location and strand information: 145691 - 147016 (+)
Family: null
Protein type: null
Protein description: Outer membrane protein TolC

Gene clsuter ID: MGYG000000442_3|CGC2
Gene ID: MGYG000000442_00422
Location and strand information: 147652 - 148998 (+)
Family: 3.A.5.1.1
Protein type: TC
Protein description: Signal recognition particle protein

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000442_00406	GH127_e2\|3.2.1.-	carrageenan
MGYG000000442_00408	GH78_e26\|3.2.1.40	alpha-rhamnoside
MGYG000000442_00409	GH138_e0\|3.2.1.-
MGYG000000442_00411	GH2_e49\|GH137_e0\|CBM57_e1\|3.2.1.31\|3.2.1.185	pectin\|beta-glucuronan
MGYG000000442_00412	GH2_e51
MGYG000000442_00413	GH106_e13\|3.2.1.40	pectin
MGYG000000442_00415	GH139_e0\|3.2.1.-	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000442_00406	Non-reducing end beta-L-arabinofuranosidase	CAZyme	116475	118562	+	GH127
MGYG000000442_00407	hypothetical protein	TC	118790	120160	+	2.A.1.1.74
MGYG000000442_00408	hypothetical protein	CAZyme	120144	122297	+	GH78
MGYG000000442_00409	hypothetical protein	CAZyme	122309	125008	+	GH138
MGYG000000442_00410	hypothetical protein	null	125221	125682	+	HU-HIG
MGYG000000442_00411	Beta-galactosidase	CAZyme	125758	129942	+	GH137\| GH2\| CBM57
MGYG000000442_00412	Beta-galactosidase	CAZyme	129956	133288	+	GH2
MGYG000000442_00413	hypothetical protein	CAZyme	133536	136796	+	3.2.1.40\| GH106
MGYG000000442_00414	hypothetical protein	null	136820	138283	+	SASA
MGYG000000442_00415	hypothetical protein	CAZyme	138304	140571	+	GH139
MGYG000000442_00416	hypothetical protein	null	140568	140675	-	No domain
MGYG000000442_00417	putative ABC transporter ATP-binding protein YknY	TC	141261	141980	+	3.A.1.122.2
MGYG000000442_00418	Macrolide export ATP-binding/permease protein MacB	TC	141977	143251	+	3.A.1.122.2
MGYG000000442_00419	Macrolide export ATP-binding/permease protein MacB	TC	143280	144530	+	3.A.1.122.1
MGYG000000442_00420	Macrolide export protein MacA	null	144573	145676	+	HlyD_D23
MGYG000000442_00421	Outer membrane protein TolC	null	145691	147016	+	OEP\| OEP
MGYG000000442_00422	Signal recognition particle protein	TC	147652	148998	+	3.A.5.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature